Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar transferase | DUE52_15110 | Not Available | Negative | 3715376 - 3716032 | 25099.0 |
| capsular biosynthesis protein | DUE52_15115 | Not Available | Negative | 3716134 - 3718491 | 88386.8 |
| polysaccharide export protein | DUE52_15120 | Not Available | Negative | 3718570 - 3719355 | 28991.2 |
| transposase | DUE52_15125 | Not Available | Positive | 3719755 - 3720078 | 12628.0 |
| hypothetical protein | DUE52_15130 | Not Available | Negative | 3720664 - 3721797 | 44229.7 |
| hypothetical protein | DUE52_15135 | Not Available | Negative | 3721811 - 3722062 | 8996.72 |
| lyttr family transcriptional regulator | DUE52_15140 | Not Available | Positive | 3722227 - 3723219 | 38575.2 |
| dna-binding response regulator | DUE52_15145 | Not Available | Negative | 3723281 - 3723979 | 26255.6 |
| helix-turn-helix domain-containing protein | DUE52_15150 | Not Available | Positive | 3724072 - 3724725 | 25438.1 |
| dna primase | DUE52_15155 | Not Available | Negative | 3724794 - 3726779 | 75399.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
