Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ncs2 family permease | DUE52_01440 | Not Available | Positive | 369223 - 370539 | 46280.9 |
| rida family protein | DUE52_01445 | Not Available | Negative | 370543 - 370971 | 15599.6 |
| 5'-methylthioadenosine/adenosylhomocysteine nucleosidase | DUE52_01450 | Not Available | Positive | 371016 - 371870 | 31178.0 |
| hypothetical protein | DUE52_01455 | Not Available | Negative | 371994 - 372737 | 25972.6 |
| aminoglycoside phosphotransferase family protein | DUE52_01460 | Not Available | Negative | 372734 - 373828 | 41070.8 |
| exo-alpha-sialidase | DUE52_01465 | Not Available | Negative | 373830 - 375095 | 47628.3 |
| exo-alpha-sialidase | DUE52_01470 | Not Available | Negative | 375079 - 376236 | 43729.6 |
| ragb/susd family nutrient uptake outer membrane protein | DUE52_01475 | Not Available | Negative | 376265 - 377719 | 54079.8 |
| tonb-dependent receptor | DUE52_01480 | Not Available | Negative | 377898 - 381302 | 122504.0 |
| duf4974 domain-containing protein | DUE52_01485 | Not Available | Negative | 381528 - 382532 | 38188.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
