Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| t9ss c-terminal target domain-containing protein | DUE52_00085 | Not Available | Negative | 22200 - 23276 | 38590.2 |
| t9ss c-terminal target domain-containing protein | DUE52_00090 | Not Available | Negative | 23345 - 24499 | 41859.5 |
| nucleoside triphosphate pyrophosphohydrolase | DUE52_00095 | Not Available | Negative | 24646 - 25497 | 33082.1 |
| duf1361 domain-containing protein | DUE52_00100 | Not Available | Positive | 25780 - 26445 | 25893.4 |
| diacylglycerol kinase family protein | DUE52_00105 | Not Available | Positive | 26429 - 26821 | 14509.3 |
| hypothetical protein | DUE52_00110 | Not Available | Positive | 27049 - 27702 | 24246.0 |
| transcriptional regulator | DUE52_00115 | Not Available | Positive | 27702 - 27998 | 10925.1 |
| hypothetical protein | DUE52_00120 | Not Available | Negative | 28052 - 28444 | 14510.7 |
| hypothetical protein | DUE52_00125 | Not Available | Positive | 28630 - 29400 | 29325.7 |
| glycosyltransferase family 1 protein | DUE52_00130 | Not Available | Positive | 29405 - 30457 | 40012.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
