Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_15010 | Not Available | Negative | 3696189 - 3696962 | 29669.8 |
| hypothetical protein | DUE52_15015 | Not Available | Negative | 3697141 - 3697503 | 13766.2 |
| hypothetical protein | DUE52_15020 | Not Available | Negative | 3697660 - 3698370 | 27920.3 |
| hypothetical protein | DUE52_15025 | Not Available | Negative | 3698386 - 3699066 | 25788.5 |
| xre family transcriptional regulator | DUE52_15030 | Not Available | Positive | 3699363 - 3699788 | 16262.9 |
| histidinol-phosphatase | DUE52_15035 | Not Available | Positive | 3699821 - 3700561 | 28033.5 |
| udp-glucose/gdp-mannose dehydrogenase family protein | DUE52_15040 | Not Available | Positive | 3701003 - 3702334 | 48659.6 |
| (d)cmp kinase | DUE52_15045 | Not Available | Positive | 3702488 - 3703240 | 28079.9 |
| hypothetical protein | DUE52_15050 | Not Available | Positive | 3703292 - 3704764 | 54709.2 |
| endo-1,4-beta-xylanase | DUE52_15055 | Not Available | Negative | 3704789 - 3705832 | 39915.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
