Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycogen synthase | DUE52_14910 | Not Available | Positive | 3674618 - 3675427 | 31260.3 |
| duf4270 family protein | DUE52_14915 | Not Available | Positive | 3675336 - 3676808 | 52949.6 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | DUE52_14920 | Not Available | Positive | 3677017 - 3678870 | 67751.0 |
| tetratricopeptide repeat protein | DUE52_14925 | Not Available | Negative | 3678960 - 3679805 | 33452.1 |
| hypothetical protein | DUE52_14930 | Not Available | Negative | 3679777 - 3680277 | 19826.8 |
| rida family protein | DUE52_14935 | Not Available | Positive | 3680519 - 3680890 | 13283.0 |
| glutamate--trna ligase | DUE52_14940 | Not Available | Positive | 3680999 - 3682525 | 56716.0 |
| hypothetical protein | DUE52_14945 | Not Available | Positive | 3682597 - 3682839 | 9285.7 |
| tigr00266 family protein | DUE52_14950 | Not Available | Positive | 3682898 - 3683677 | 27866.9 |
| duf4160 domain-containing protein | DUE52_14955 | Not Available | Positive | 3683680 - 3683955 | 10473.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
