Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DUE52_14810 | Not Available | Negative | 3647351 - 3649783 | 91599.5 |
| nad(p)/fad-dependent oxidoreductase | DUE52_14815 | Not Available | Positive | 3649913 - 3651259 | 50262.1 |
| s46 family peptidase | DUE52_14820 | Not Available | Positive | 3651300 - 3653465 | 80183.2 |
| thiosulfate reductase | DUE52_14825 | Not Available | Positive | 3653462 - 3654154 | 26814.3 |
| molybdopterin-binding oxidoreductase | DUE52_14830 | Not Available | Positive | 3654171 - 3654977 | 30686.9 |
| s9 family peptidase | DUE52_14835 | Not Available | Positive | 3655686 - 3657965 | 83043.3 |
| susc/raga family tonb-linked outer membrane protein | DUE52_14840 | Not Available | Positive | 3658605 - 3661775 | 115030.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DUE52_14845 | Not Available | Positive | 3661797 - 3663263 | 53575.6 |
| hypothetical protein | DUE52_14850 | Not Available | Positive | 3663288 - 3663788 | 17402.3 |
| histidinol-phosphate aminotransferase family protein | DUE52_14855 | Not Available | Positive | 3663820 - 3664968 | 41732.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
