Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| omph family outer membrane protein | DUE52_14760 | Not Available | Positive | 3633229 - 3633870 | 23491.2 |
| hypothetical protein | DUE52_14765 | Not Available | Positive | 3634100 - 3635719 | 61145.7 |
| lipoprotein signal peptidase | DUE52_14770 | Not Available | Negative | 3635858 - 3636637 | 28853.6 |
| proline dehydrogenase | DUE52_14775 | Not Available | Negative | 3636736 - 3637968 | 47165.8 |
| 3-deoxy-7-phosphoheptulonate synthase | DUE52_14780 | Not Available | Positive | 3638188 - 3639291 | 41050.6 |
| duf4249 domain-containing protein | DUE52_14785 | Not Available | Negative | 3639371 - 3640273 | 33771.1 |
| tonb-dependent receptor | DUE52_14790 | Not Available | Negative | 3640278 - 3642758 | 91880.9 |
| duf4249 domain-containing protein | DUE52_14795 | Not Available | Negative | 3642877 - 3643824 | 35121.5 |
| tonb-dependent receptor | DUE52_14800 | Not Available | Negative | 3643831 - 3646272 | 91886.9 |
| duf4249 domain-containing protein | DUE52_14805 | Not Available | Negative | 3646376 - 3647344 | 35607.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
