Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fasciclin domain-containing protein | DUE52_14660 | Not Available | Negative | 3603411 - 3604394 | 33721.6 |
| duf1080 domain-containing protein | DUE52_14665 | Not Available | Positive | 3604579 - 3605181 | 22489.0 |
| hypothetical protein | DUE52_14670 | Not Available | Negative | 3605245 - 3605691 | 16224.4 |
| class i sam-dependent methyltransferase | DUE52_14675 | Not Available | Negative | 3605814 - 3606761 | 36275.9 |
| response regulator | DUE52_14680 | Not Available | Positive | 3607257 - 3610037 | 104273.0 |
| hypothetical protein | DUE52_14685 | Not Available | Positive | 3610218 - 3611345 | 41839.6 |
| heparan n-sulfatase | DUE52_14690 | Not Available | Positive | 3611563 - 3612960 | 52717.1 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DUE52_14695 | Not Available | Negative | 3613062 - 3614624 | 56848.2 |
| susc/raga family tonb-linked outer membrane protein | DUE52_14700 | Not Available | Negative | 3614641 - 3618087 | 125516.0 |
| hypothetical protein | DUE52_14705 | Not Available | Negative | 3618214 - 3618408 | 7589.09 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
