Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4926 domain-containing protein | DUE52_14610 | Not Available | Negative | 3594998 - 3595210 | 7847.72 |
| type ii toxin-antitoxin system vapc family toxin | DUE52_14615 | Not Available | Positive | 3595512 - 3595922 | 15670.2 |
| hypothetical protein | DUE52_14620 | Not Available | Negative | 3596159 - 3597235 | 40191.6 |
| potassium channel protein | DUE52_14625 | Not Available | Positive | 3597449 - 3598465 | 37725.2 |
| dmt family transporter | DUE52_14630 | Not Available | Positive | 3598574 - 3599428 | 31436.6 |
| thioredoxin | DUE52_14635 | Not Available | Negative | 3599418 - 3599744 | 12143.8 |
| hypothetical protein | DUE52_14640 | Not Available | Negative | 3599827 - 3600306 | 18167.8 |
| methyltransferase domain-containing protein | DUE52_14645 | Not Available | Positive | 3600427 - 3601236 | 30280.1 |
| hypothetical protein | DUE52_14650 | Not Available | Negative | 3601338 - 3602255 | 32852.3 |
| twin-arginine translocation pathway signal | DUE52_14655 | Not Available | Negative | 3602340 - 3603398 | 39525.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
