Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydropyrimidinase | DUE52_14510 | Not Available | Negative | 3566707 - 3568089 | 50921.0 |
| nitrate reductase | DUE52_14515 | Not Available | Negative | 3568073 - 3569581 | 54844.8 |
| hypothetical protein | DUE52_14520 | Not Available | Positive | 3569782 - 3570822 | 39115.5 |
| gntr family transcriptional regulator | DUE52_14525 | Not Available | Positive | 3570971 - 3571609 | 24347.5 |
| tonb-dependent receptor | DUE52_14530 | Not Available | Positive | 3572171 - 3575347 | 113896.0 |
| ragb/susd family nutrient uptake outer membrane protein | DUE52_14535 | Not Available | Positive | 3575375 - 3577153 | 65367.9 |
| gfo/idh/moca family oxidoreductase | DUE52_14540 | Not Available | Positive | 3577281 - 3578480 | 43405.7 |
| gfo/idh/moca family oxidoreductase | DUE52_14545 | Not Available | Positive | 3578605 - 3579831 | 45422.3 |
| aminotransferase class iii-fold pyridoxal phosphate-dependent enzyme | DUE52_14550 | Not Available | Positive | 3579981 - 3581333 | 49610.3 |
| galactonate dehydratase | DUE52_14555 | Not Available | Positive | 3581352 - 3582530 | 44177.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
