Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_14460 | Not Available | Negative | 3556487 - 3557515 | 38846.8 |
| endonuclease | DUE52_14465 | Not Available | Negative | 3557612 - 3558685 | 41377.0 |
| phytanoyl-coa dioxygenase | DUE52_14470 | Not Available | Positive | 3558961 - 3559743 | 29196.9 |
| paai family thioesterase | DUE52_14475 | Not Available | Negative | 3560344 - 3560790 | 16034.2 |
| phosphosulfolactate synthase | DUE52_14480 | Not Available | Positive | 3560933 - 3561727 | 29630.4 |
| deda family protein | DUE52_14485 | Not Available | Positive | 3561748 - 3562398 | 23873.1 |
| cold shock domain-containing protein | DUE52_14490 | Not Available | Negative | 3562762 - 3562956 | 7146.38 |
| nad-dependent dihydropyrimidine dehydrogenase subunit prea | DUE52_14495 | Not Available | Negative | 3563130 - 3564398 | 46329.7 |
| nad(p)-dependent oxidoreductase | DUE52_14500 | Not Available | Negative | 3564402 - 3565742 | 47903.6 |
| acyltransferase | DUE52_14505 | Not Available | Negative | 3565829 - 3566662 | 31595.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
