Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s9 family peptidase | DUE52_14410 | Not Available | Positive | 3546523 - 3548640 | 76786.9 |
| duf4377 domain-containing protein | DUE52_14415 | Not Available | Positive | 3548723 - 3549043 | 12096.7 |
| hypothetical protein | DUE52_14420 | Not Available | Positive | 3549065 - 3549718 | 23916.8 |
| gfo/idh/moca family oxidoreductase | DUE52_14425 | Not Available | Positive | 3549773 - 3550855 | 39683.2 |
| yihy/virulence factor brkb family protein | DUE52_14430 | Not Available | Negative | 3550866 - 3551735 | 32400.7 |
| thioredoxin family protein | DUE52_14435 | Not Available | Positive | 3551944 - 3552462 | 19246.0 |
| hypothetical protein | DUE52_14440 | Not Available | Positive | 3552529 - 3553320 | 29664.4 |
| duf4374 domain-containing protein | DUE52_14445 | Not Available | Negative | 3553780 - 3555009 | 43992.1 |
| hypothetical protein | DUE52_14450 | Not Available | Negative | 3555179 - 3555577 | 15187.6 |
| dna-binding response regulator | DUE52_14455 | Not Available | Negative | 3555720 - 3556487 | 29405.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
