Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide pyruvyl transferase family protein | DUE52_14360 | Not Available | Positive | 3533676 - 3534962 | 47304.8 |
| polysaccharide pyruvyl transferase family protein | DUE52_14365 | Not Available | Positive | 3535051 - 3536325 | 47115.4 |
| polysaccharide pyruvyl transferase family protein | DUE52_14370 | Not Available | Positive | 3536414 - 3537685 | 47480.9 |
| alpha/beta hydrolase | DUE52_14375 | Not Available | Negative | 3537706 - 3538596 | 33028.9 |
| 6-phosphogluconolactonase | DUE52_14380 | Not Available | Negative | 3538737 - 3539471 | 26898.9 |
| glucose-6-phosphate dehydrogenase | DUE52_14385 | Not Available | Negative | 3539471 - 3540985 | 57811.7 |
| nadp-dependent phosphogluconate dehydrogenase | DUE52_14390 | Not Available | Negative | 3540982 - 3542409 | 52124.9 |
| transaldolase | DUE52_14395 | Not Available | Negative | 3542491 - 3543594 | 40540.1 |
| ribose 5-phosphate isomerase b | DUE52_14400 | Not Available | Negative | 3543750 - 3544196 | 16152.3 |
| transketolase | DUE52_14405 | Not Available | Negative | 3544315 - 3546327 | 74009.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
