Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine hydrolase | DUE52_14310 | Not Available | Negative | 3520476 - 3522044 | 58351.0 |
| t9ss c-terminal target domain-containing protein | DUE52_14315 | Not Available | Positive | 3522258 - 3522653 | 14198.8 |
| short chain dehydrogenase | DUE52_14320 | Not Available | Negative | 3522730 - 3523446 | 25633.6 |
| cupin domain-containing protein | DUE52_14325 | Not Available | Positive | 3523586 - 3524350 | 28349.2 |
| plp-dependent aminotransferase family protein | DUE52_14330 | Not Available | Negative | 3524606 - 3526075 | 54587.1 |
| pyridoxamine 5'-phosphate oxidase family protein | DUE52_14335 | Not Available | Positive | 3526163 - 3526783 | 22827.3 |
| sigma-70 family rna polymerase sigma factor | DUE52_14340 | Not Available | Positive | 3526895 - 3527506 | 23997.5 |
| fecr family protein | DUE52_14345 | Not Available | Positive | 3527576 - 3528685 | 41829.5 |
| susc/raga family tonb-linked outer membrane protein | DUE52_14350 | Not Available | Positive | 3528835 - 3532188 | 120717.0 |
| ragb/susd family nutrient uptake outer membrane protein | DUE52_14355 | Not Available | Positive | 3532202 - 3533644 | 52533.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
