Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coce/nond family hydrolase | DUE52_14210 | Not Available | Positive | 3491025 - 3492899 | 71034.0 |
| peptidase | DUE52_14215 | Not Available | Positive | 3493022 - 3493798 | 29275.9 |
| chat domain-containing protein | DUE52_14220 | Not Available | Negative | 3493795 - 3497433 | 137938.0 |
| hypothetical protein | DUE52_14225 | Not Available | Negative | 3497883 - 3498383 | 18596.4 |
| hypothetical protein | DUE52_14230 | Not Available | Negative | 3498570 - 3499283 | 26315.4 |
| lamg domain-containing protein | DUE52_14235 | Not Available | Negative | 3499325 - 3500125 | 29067.6 |
| mfs transporter | DUE52_14240 | Not Available | Negative | 3500173 - 3501429 | 45677.6 |
| beta-mannosidase | DUE52_14245 | Not Available | Negative | 3501432 - 3504311 | 108146.0 |
| hypothetical protein | DUE52_14250 | Not Available | Positive | 3504330 - 3504560 | 9036.91 |
| pin domain-containing protein | DUE52_14255 | Not Available | Positive | 3504557 - 3505018 | 17438.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
