Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| padr family transcriptional regulator | DUE52_14160 | Not Available | Positive | 3479050 - 3479385 | 12264.9 |
| abc transporter permease | DUE52_14165 | Not Available | Positive | 3479625 - 3482027 | 89415.1 |
| duf1080 domain-containing protein | DUE52_14170 | Not Available | Negative | 3482141 - 3483103 | 36380.5 |
| duf2236 domain-containing protein | DUE52_14175 | Not Available | Negative | 3483183 - 3484088 | 35319.8 |
| (2fe-2s)-binding protein | DUE52_14180 | Not Available | Positive | 3484327 - 3484785 | 16293.7 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | DUE52_14185 | Not Available | Positive | 3484816 - 3486957 | 77522.0 |
| acetolactate decarboxylase | DUE52_14190 | Not Available | Positive | 3486965 - 3487831 | 32119.3 |
| transcription elongation factor greab | DUE52_14195 | Not Available | Positive | 3488022 - 3488543 | 18770.4 |
| duf4403 family protein | DUE52_14200 | Not Available | Positive | 3488640 - 3490025 | 51213.7 |
| esterase family protein | DUE52_14205 | Not Available | Negative | 3490030 - 3490899 | 33657.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
