Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arylsulfatase | DUE52_14110 | Not Available | Negative | 3463857 - 3465254 | 51930.4 |
| acetylxylan esterase | DUE52_14115 | Not Available | Positive | 3465383 - 3466552 | 42562.2 |
| fad-binding oxidoreductase | DUE52_14120 | Not Available | Positive | 3466743 - 3467876 | 41615.2 |
| rida family protein | DUE52_14125 | Not Available | Positive | 3467944 - 3468456 | 17830.8 |
| alpha-galactosidase | DUE52_14130 | Not Available | Positive | 3468513 - 3470705 | 83027.8 |
| carboxypeptidase regulatory-like domain-containing protein | DUE52_14135 | Not Available | Positive | 3470832 - 3471569 | 26617.6 |
| hypothetical protein | DUE52_14140 | Not Available | Negative | 3471579 - 3473804 | 81140.3 |
| hypothetical protein | DUE52_14145 | Not Available | Negative | 3473896 - 3474510 | 23138.4 |
| hypothetical protein | DUE52_14150 | Not Available | Positive | 3474668 - 3477811 | 118267.0 |
| dna-binding response regulator | DUE52_14155 | Not Available | Positive | 3477789 - 3478529 | 28321.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
