Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptide epimerase | DUE52_01340 | Not Available | Positive | 343712 - 344812 | 40397.6 |
| abc transporter atp-binding protein | DUE52_01345 | Not Available | Negative | 345053 - 346834 | 67251.3 |
| transcription antitermination factor nusb | DUE52_01350 | Not Available | Positive | 347089 - 348225 | 43739.2 |
| ytxh domain-containing protein | DUE52_01355 | Not Available | Positive | 348288 - 348590 | 11231.6 |
| duf1573 domain-containing protein | DUE52_01360 | Not Available | Positive | 348672 - 349109 | 15907.0 |
| preprotein translocase subunit yajc | DUE52_01365 | Not Available | Positive | 349187 - 349504 | 11616.3 |
| hypothetical protein | DUE52_01370 | Not Available | Positive | 349633 - 350421 | 29130.6 |
| dephospho-coa kinase | DUE52_01375 | Not Available | Positive | 350430 - 351038 | 22731.3 |
| amidase | DUE52_01380 | Not Available | Positive | 351232 - 352884 | 59699.7 |
| arylsulfatase | DUE52_01385 | Not Available | Negative | 353057 - 354652 | 59715.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
