Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_14010 | Not Available | Positive | 3433330 - 3433587 | 9114.12 |
| hypothetical protein | DUE52_14015 | Not Available | Negative | 3433639 - 3433854 | 8160.99 |
| amidohydrolase | DUE52_14020 | Not Available | Positive | 3434157 - 3437411 | 120307.0 |
| hypothetical protein | DUE52_14025 | Not Available | Positive | 3437538 - 3438062 | 18743.3 |
| gliding motility-associated c-terminal domain-containing protein | DUE52_14030 | Not Available | Negative | 3438166 - 3440529 | 84440.0 |
| chbg/hpnk family deacetylase | DUE52_14035 | Not Available | Negative | 3440771 - 3441634 | 32322.2 |
| susc/raga family tonb-linked outer membrane protein | DUE52_14040 | Not Available | Positive | 3442080 - 3445175 | 112814.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DUE52_14045 | Not Available | Positive | 3445187 - 3446647 | 53057.8 |
| membrane dipeptidase | DUE52_14050 | Not Available | Positive | 3446644 - 3447918 | 46640.1 |
| duf4412 domain-containing protein | DUE52_14055 | Not Available | Positive | 3448064 - 3448777 | 26575.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
