Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | DUE52_13960 | Not Available | Positive | 3416866 - 3417927 | 40208.4 |
| duf2278 family protein | DUE52_13965 | Not Available | Positive | 3417946 - 3421731 | 141302.0 |
| glycoside hydrolase family 92 protein | DUE52_13970 | Not Available | Positive | 3421808 - 3424099 | 86315.1 |
| na+/h+ antiporter | DUE52_13975 | Not Available | Negative | 3424109 - 3425728 | 59962.4 |
| serine hydrolase | DUE52_13980 | Not Available | Positive | 3425803 - 3426717 | 34041.5 |
| tlpa family protein disulfide reductase | DUE52_13985 | Not Available | Positive | 3426897 - 3428135 | 47148.2 |
| thua domain-containing protein | DUE52_13990 | Not Available | Negative | 3428142 - 3428987 | 32105.1 |
| gfo/idh/moca family oxidoreductase | DUE52_13995 | Not Available | Negative | 3429006 - 3430178 | 42666.3 |
| oxidoreductase | DUE52_14000 | Not Available | Negative | 3430186 - 3431574 | 51890.1 |
| gfo/idh/moca family oxidoreductase | DUE52_14005 | Not Available | Negative | 3431602 - 3433023 | 52370.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
