Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DUE52_13910 | Not Available | Positive | 3403242 - 3405164 | 72511.5 |
| duf5074 domain-containing protein | DUE52_13915 | Not Available | Positive | 3405161 - 3406279 | 40273.3 |
| atp-binding protein | DUE52_13920 | Not Available | Positive | 3406374 - 3407066 | 25803.9 |
| hypothetical protein | DUE52_13925 | Not Available | Negative | 3407268 - 3407534 | 10111.6 |
| hypothetical protein | DUE52_13930 | Not Available | Negative | 3407590 - 3409029 | 52972.8 |
| dna gyrase subunit a | DUE52_13935 | Not Available | Negative | 3409101 - 3411650 | 94877.9 |
| hypothetical protein | DUE52_13940 | Not Available | Negative | 3411746 - 3411958 | 7915.74 |
| response regulator | DUE52_13945 | Not Available | Positive | 3412148 - 3412567 | 15910.0 |
| response regulator | DUE52_13950 | Not Available | Positive | 3412800 - 3415202 | 90070.2 |
| chat domain-containing protein | DUE52_13955 | Not Available | Positive | 3415282 - 3416862 | 59959.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
