Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit delta | DUE52_13810 | Not Available | Positive | 3377974 - 3378993 | 38345.8 |
| Trna-met | Not Available | Not Available | Positive | 3379142 - 3379218 | Not Available |
| atpase | DUE52_13820 | Not Available | Positive | 3379333 - 3379728 | 15268.7 |
| yjgp/yjgq family permease | DUE52_13825 | Not Available | Positive | 3379735 - 3381252 | 57530.4 |
| 30s ribosomal protein s15 | DUE52_13830 | Not Available | Positive | 3381342 - 3381617 | 10673.1 |
| polyribonucleotide nucleotidyltransferase | DUE52_13835 | Not Available | Positive | 3381816 - 3383957 | 78117.9 |
| rna polymerase subunit sigma | DUE52_13840 | Not Available | Positive | 3384076 - 3384939 | 32666.1 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | DUE52_13845 | Not Available | Positive | 3385048 - 3386799 | 65789.0 |
| tetratricopeptide repeat protein | DUE52_13850 | Not Available | Negative | 3386903 - 3387970 | 40462.4 |
| hypothetical protein | DUE52_13855 | Not Available | Positive | 3388025 - 3388270 | 9927.81 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
