Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| t9ss c-terminal target domain-containing protein | DUE52_13760 | Not Available | Positive | 3367749 - 3369128 | 51634.7 |
| gnat family n-acetyltransferase | DUE52_13765 | Not Available | Positive | 3369167 - 3369616 | 16716.2 |
| comec family competence protein | DUE52_13770 | Not Available | Positive | 3369616 - 3371709 | 78411.9 |
| t9ss c-terminal target domain-containing protein | DUE52_13775 | Not Available | Negative | 3371713 - 3372978 | 45313.8 |
| 3-hydroxybutyrate dehydrogenase | DUE52_13780 | Not Available | Negative | 3373105 - 3373881 | 27339.0 |
| yajq family cyclic di-gmp-binding protein | DUE52_13785 | Not Available | Positive | 3374035 - 3374526 | 18551.5 |
| tetr/acrr family transcriptional regulator | DUE52_13790 | Not Available | Positive | 3374558 - 3375226 | 26017.8 |
| aarf/abc1/ubib kinase family protein | DUE52_13795 | Not Available | Positive | 3375332 - 3376675 | 51514.9 |
| cytidine deaminase | DUE52_13800 | Not Available | Positive | 3376813 - 3377313 | 18068.8 |
| duf479 domain-containing protein | DUE52_13805 | Not Available | Positive | 3377326 - 3377931 | 23375.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
