Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4136 domain-containing protein | DUE52_13710 | Not Available | Negative | 3356502 - 3357005 | 19032.8 |
| Trna-lys | Not Available | Not Available | Positive | 3357191 - 3357266 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 3357350 - 3357425 | Not Available |
| hypothetical protein | DUE52_13725 | Not Available | Positive | 3357543 - 3358277 | 28390.6 |
| short chain dehydrogenase | DUE52_13730 | Not Available | Negative | 3358493 - 3359308 | 29849.5 |
| chrd domain-containing protein | DUE52_13735 | Not Available | Positive | 3359487 - 3359942 | 15809.9 |
| gliding motility-associated c-terminal domain-containing protein | DUE52_13740 | Not Available | Negative | 3360007 - 3362253 | 83347.4 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | DUE52_13745 | Not Available | Positive | 3362322 - 3363767 | 54006.8 |
| replicative dna helicase | DUE52_13750 | Not Available | Negative | 3363847 - 3366504 | 98910.7 |
| phoh family protein | DUE52_13755 | Not Available | Positive | 3366872 - 3367819 | 35264.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
