Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5'/3'-nucleotidase sure | DUE52_13660 | Not Available | Negative | 3345640 - 3346485 | 30705.2 |
| gnat family n-acetyltransferase | DUE52_13665 | Not Available | Positive | 3346595 - 3347104 | 19769.8 |
| rhodanese-related sulfurtransferase | DUE52_13670 | Not Available | Negative | 3347087 - 3348043 | 36157.9 |
| deoxynucleoside kinase | DUE52_13675 | Not Available | Positive | 3348129 - 3348740 | 23641.1 |
| sos response-associated peptidase | DUE52_13680 | Not Available | Negative | 3348746 - 3349363 | 23702.7 |
| response regulator | DUE52_13685 | Not Available | Positive | 3349603 - 3353781 | 157580.0 |
| histidine phosphatase family protein | DUE52_13690 | Not Available | Negative | 3354099 - 3354725 | 24116.8 |
| Trna-leu | Not Available | Not Available | Positive | 3354828 - 3354910 | Not Available |
| isoprenoid biosynthesis protein elbb | DUE52_13700 | Not Available | Negative | 3355223 - 3355912 | 24589.8 |
| duf3127 domain-containing protein | DUE52_13705 | Not Available | Positive | 3356049 - 3356450 | 14692.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
