Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose/galactose mfs transporter | DUE52_13610 | Not Available | Negative | 3333654 - 3334886 | 44028.1 |
| gfo/idh/moca family oxidoreductase | DUE52_13615 | Not Available | Negative | 3335006 - 3336358 | 50126.8 |
| 6-carboxytetrahydropterin synthase | DUE52_13620 | Not Available | Positive | 3336697 - 3337113 | 16284.3 |
| gtp cyclohydrolase i fole | DUE52_13625 | Not Available | Positive | 3337076 - 3337810 | 27312.6 |
| sugar phosphate isomerase/epimerase | DUE52_13630 | Not Available | Negative | 3337891 - 3338826 | 34459.4 |
| hypothetical protein | DUE52_13635 | Not Available | Positive | 3339055 - 3341424 | 87713.7 |
| cation transporter | DUE52_13640 | Not Available | Negative | 3341709 - 3342713 | 37432.3 |
| nudix hydrolase | DUE52_13645 | Not Available | Positive | 3342784 - 3343332 | 20497.1 |
| lyse family translocator | DUE52_13650 | Not Available | Positive | 3343340 - 3343978 | 23887.8 |
| gh3 auxin-responsive promoter | DUE52_13655 | Not Available | Negative | 3344056 - 3345627 | 60019.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
