Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen-iii synthase | DUE52_01290 | Not Available | Negative | 332724 - 333509 | 29521.4 |
| duf4271 domain-containing protein | DUE52_01295 | Not Available | Negative | 333549 - 334703 | 44080.5 |
| succinate--coa ligase subunit alpha | DUE52_01300 | Not Available | Negative | 334818 - 335696 | 30217.0 |
| hypothetical protein | DUE52_01305 | Not Available | Positive | 335912 - 336523 | 22420.6 |
| dna polymerase iii subunit gamma/tau | DUE52_01310 | Not Available | Positive | 336584 - 338419 | 68588.0 |
| phosphotriesterase | DUE52_01315 | Not Available | Negative | 338549 - 339547 | 37199.2 |
| hypothetical protein | DUE52_01320 | Not Available | Negative | 339562 - 340671 | 42478.4 |
| insulinase family protein | DUE52_01325 | Not Available | Positive | 340785 - 342020 | 46205.7 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | DUE52_01330 | Not Available | Positive | 342032 - 342508 | 17423.2 |
| amidohydrolase | DUE52_01335 | Not Available | Positive | 342555 - 343706 | 44200.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
