Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtab | DUE52_13510 | Not Available | Negative | 3312084 - 3313433 | 50484.6 |
| lta synthase family protein | DUE52_13515 | Not Available | Negative | 3313595 - 3315427 | 68290.7 |
| glutamine synthetase type iii | DUE52_13520 | Not Available | Positive | 3315747 - 3317936 | 81199.9 |
| peptidase m28 | DUE52_13525 | Not Available | Positive | 3318139 - 3319347 | 45294.2 |
| hypothetical protein | DUE52_13530 | Not Available | Positive | 3319441 - 3320010 | 22134.7 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | DUE52_13535 | Not Available | Positive | 3320040 - 3320741 | 26455.0 |
| duf4159 domain-containing protein | DUE52_13540 | Not Available | Positive | 3320744 - 3321415 | 25469.4 |
| acyl-coa desaturase | DUE52_13545 | Not Available | Positive | 3321541 - 3322353 | 32173.8 |
| 5'(3')-deoxyribonucleotidase | DUE52_13550 | Not Available | Negative | 3322521 - 3323048 | 20426.4 |
| hypothetical protein | DUE52_13555 | Not Available | Negative | 3323045 - 3323662 | 22262.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
