Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate aminotransferase family protein | DUE52_13405 | Not Available | Negative | 3289353 - 3290546 | 43593.8 |
| hypothetical protein | DUE52_13410 | Not Available | Positive | 3290590 - 3291543 | 35481.2 |
| hypothetical protein | DUE52_13415 | Not Available | Negative | 3291633 - 3292823 | 46111.9 |
| gmp synthase | DUE52_13420 | Not Available | Negative | 3292877 - 3293674 | 30761.6 |
| carboxylate-amine ligase | DUE52_13425 | Not Available | Negative | 3293815 - 3294915 | 42575.1 |
| dinb family protein | DUE52_13435 | Not Available | Negative | 3296027 - 3296497 | 18494.1 |
| alpha/beta fold hydrolase | DUE52_13440 | Not Available | Negative | 3296814 - 3297518 | 27957.2 |
| esterase family protein | DUE52_13445 | Not Available | Positive | 3297677 - 3298549 | 32872.8 |
| glycoside hydrolase family 16 protein | DUE52_13450 | Not Available | Positive | 3298622 - 3299419 | 30115.8 |
| chat domain-containing protein | DUE52_13455 | Not Available | Negative | 3299413 - 3302214 | 107136.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
