Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_13355 | Not Available | Positive | 3273613 - 3273924 | 12250.8 |
| dna polymerase iii subunit alpha | DUE52_13360 | Not Available | Positive | 3273941 - 3277513 | 135184.0 |
| thioredoxin | DUE52_13365 | Not Available | Positive | 3277588 - 3277908 | 11509.3 |
| acylase | DUE52_13370 | Not Available | Positive | 3278075 - 3280267 | 82472.1 |
| dsba family protein | DUE52_13375 | Not Available | Negative | 3280310 - 3281230 | 34712.3 |
| atp-dependent dna helicase uvrd2 | DUE52_13380 | Not Available | Negative | 3281257 - 3283359 | 79852.8 |
| hypothetical protein | DUE52_13385 | Not Available | Negative | 3283494 - 3283976 | 18448.0 |
| fadr family transcriptional regulator | DUE52_13390 | Not Available | Positive | 3284210 - 3284881 | 25497.8 |
| acrb/acrd/acrf family protein | DUE52_13395 | Not Available | Positive | 3284930 - 3288217 | 118800.0 |
| efflux rnd transporter periplasmic adaptor subunit | DUE52_13400 | Not Available | Positive | 3288201 - 3289334 | 41086.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
