Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-formyltetrahydrofolate cyclo-ligase | DUE52_13305 | Not Available | Positive | 3261943 - 3262521 | 22169.6 |
| class a beta-lactamase-related serine hydrolase | DUE52_13310 | Not Available | Positive | 3262633 - 3263724 | 40668.8 |
| inositol oxygenase | DUE52_13315 | Not Available | Positive | 3263815 - 3264678 | 33912.6 |
| sodium:solute symporter | DUE52_13320 | Not Available | Positive | 3264797 - 3266245 | 52503.3 |
| nudix domain-containing protein | DUE52_13325 | Not Available | Negative | 3266230 - 3266682 | 16837.2 |
| thua domain-containing protein | DUE52_13330 | Not Available | Positive | 3266766 - 3267494 | 27055.2 |
| gfo/idh/moca family oxidoreductase | DUE52_13335 | Not Available | Negative | 3267598 - 3268761 | 42695.7 |
| penicillin-binding protein 1c | DUE52_13340 | Not Available | Negative | 3268855 - 3271122 | 84248.3 |
| mbl fold metallo-hydrolase | DUE52_13345 | Not Available | Positive | 3271337 - 3272749 | 52972.5 |
| Trna-leu | Not Available | Not Available | Positive | 3272881 - 3272964 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
