Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m61 family peptidase | DUE52_13255 | Not Available | Positive | 3249969 - 3251432 | 56638.9 |
| hypothetical protein | DUE52_13260 | Not Available | Positive | 3251494 - 3253083 | 58366.1 |
| hypothetical protein | DUE52_13265 | Not Available | Negative | 3253102 - 3253356 | 8842.42 |
| excinuclease abc subunit uvrb | DUE52_13270 | Not Available | Positive | 3253517 - 3255544 | 77254.7 |
| peptide chain release factor 1 | DUE52_13275 | Not Available | Negative | 3255579 - 3256652 | 40625.3 |
| hypothetical protein | DUE52_13280 | Not Available | Positive | 3256935 - 3257483 | 20844.2 |
| gfo/idh/moca family oxidoreductase | DUE52_13285 | Not Available | Positive | 3257694 - 3259043 | 49433.4 |
| duf1080 domain-containing protein | DUE52_13290 | Not Available | Positive | 3259142 - 3259864 | 27009.3 |
| padr family transcriptional regulator | DUE52_13295 | Not Available | Positive | 3259969 - 3260295 | 12084.7 |
| bacillithiol biosynthesis cysteine-adding enzyme bshc | DUE52_13300 | Not Available | Positive | 3260392 - 3261939 | 60037.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
