Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf58 domain-containing protein | DUE52_13205 | Not Available | Positive | 3241689 - 3242555 | 33358.0 |
| hypothetical protein | DUE52_13210 | Not Available | Positive | 3242797 - 3243552 | 29021.1 |
| vwa domain-containing protein | DUE52_13215 | Not Available | Positive | 3243563 - 3244573 | 37498.8 |
| ribonuclease hii | DUE52_13220 | Not Available | Positive | 3244649 - 3245239 | 22351.0 |
| hypothetical protein | DUE52_13225 | Not Available | Positive | 3245314 - 3246135 | 32012.0 |
| duf2480 family protein | DUE52_13230 | Not Available | Negative | 3246172 - 3246690 | 19776.9 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | DUE52_13235 | Not Available | Negative | 3246696 - 3247388 | 24847.9 |
| s41 family peptidase | DUE52_13240 | Not Available | Negative | 3247464 - 3249125 | 62072.6 |
| ribonuclease p protein component | DUE52_13245 | Not Available | Negative | 3249213 - 3249593 | 14667.1 |
| 50s ribosomal protein l34 | DUE52_13250 | Not Available | Negative | 3249677 - 3249844 | 6537.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
