Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | DUE52_13105 | Not Available | Positive | 3217688 - 3219640 | 75555.6 |
| nad-dependent succinate-semialdehyde dehydrogenase | DUE52_13110 | Not Available | Negative | 3219644 - 3220999 | 49570.9 |
| marr family transcriptional regulator | DUE52_13115 | Not Available | Negative | 3221078 - 3221596 | 19962.3 |
| hlyd family secretion protein | DUE52_13120 | Not Available | Positive | 3221829 - 3222914 | 39708.3 |
| mfs transporter | DUE52_13125 | Not Available | Positive | 3222916 - 3224490 | 56797.1 |
| tolc family protein | DUE52_13130 | Not Available | Positive | 3224630 - 3225928 | 48047.1 |
| acyl carrier protein | DUE52_13135 | Not Available | Positive | 3226076 - 3226315 | 9096.8 |
| atp-binding protein | DUE52_13140 | Not Available | Negative | 3226454 - 3227635 | 44902.7 |
| 2-phosphosulfolactate phosphatase | DUE52_13145 | Not Available | Negative | 3227718 - 3228434 | 26335.8 |
| glycine cleavage system aminomethyltransferase gcvt | DUE52_13150 | Not Available | Negative | 3228510 - 3229604 | 40205.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
