Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lrp/asnc family transcriptional regulator | DUE52_13055 | Not Available | Positive | 3209602 - 3210072 | 17193.1 |
| tetratricopeptide repeat protein | DUE52_13060 | Not Available | Negative | 3210153 - 3211370 | 47585.6 |
| hypoxanthine phosphoribosyltransferase | DUE52_13065 | Not Available | Positive | 3211494 - 3212021 | 19692.0 |
| nadh-quinone oxidoreductase subunit d | DUE52_13070 | Not Available | Negative | 3212018 - 3213253 | 46962.1 |
| 50s ribosomal protein l33 | DUE52_13075 | Not Available | Positive | 3213399 - 3213581 | 7011.59 |
| duf4295 domain-containing protein | DUE52_13080 | Not Available | Positive | 3213615 - 3213770 | 5492.88 |
| signal recognition particle-docking protein ftsy | DUE52_13085 | Not Available | Positive | 3213912 - 3214871 | 35010.3 |
| hypothetical protein | DUE52_13090 | Not Available | Positive | 3215093 - 3215566 | 17452.0 |
| hypothetical protein | DUE52_13095 | Not Available | Positive | 3215572 - 3216213 | 25130.6 |
| 30s ribosomal protein s12 methylthiotransferase rimo | DUE52_13100 | Not Available | Positive | 3216307 - 3217617 | 49512.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
