Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_01240 | Not Available | Negative | 318155 - 318409 | 9422.4 |
| hypothetical protein | DUE52_01245 | Not Available | Positive | 318566 - 320779 | 84299.4 |
| penicillin-binding protein | DUE52_01250 | Not Available | Positive | 320856 - 323207 | 89692.7 |
| glycerate kinase | DUE52_01255 | Not Available | Positive | 323304 - 324431 | 39347.2 |
| excinuclease abc subunit c | DUE52_01260 | Not Available | Positive | 324510 - 326321 | 69115.6 |
| gliding motility protein gldn | DUE52_01265 | Not Available | Negative | 326415 - 327473 | 39210.4 |
| gliding motility protein gldm | DUE52_01270 | Not Available | Negative | 327536 - 329131 | 57327.8 |
| gliding motility protein gldl | DUE52_01275 | Not Available | Negative | 329248 - 330075 | 30203.9 |
| gliding motility protein | DUE52_01280 | Not Available | Negative | 330165 - 331244 | 40575.2 |
| type ix secretion system membrane protein porp/sprf | DUE52_01285 | Not Available | Negative | 331511 - 332479 | 36143.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
