Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase subunit ii | DUE52_12955 | Not Available | Negative | 3184942 - 3186066 | 41925.4 |
| quinol:cytochrome c oxidoreductase | DUE52_12960 | Not Available | Negative | 3186109 - 3187440 | 49849.4 |
| cytochrome c | DUE52_12965 | Not Available | Negative | 3187477 - 3188085 | 22572.9 |
| duf3341 domain-containing protein | DUE52_12970 | Not Available | Negative | 3188101 - 3188634 | 19459.7 |
| hydrogenase | DUE52_12975 | Not Available | Negative | 3188681 - 3190108 | 54191.4 |
| 4fe-4s dicluster domain-containing protein | DUE52_12980 | Not Available | Negative | 3190168 - 3193272 | 112290.0 |
| cytochrome c | DUE52_12985 | Not Available | Negative | 3193319 - 3194593 | 46031.5 |
| Trna-cys | Not Available | Not Available | Positive | 3194853 - 3194923 | Not Available |
| 30s ribosomal protein s1 | DUE52_12995 | Not Available | Negative | 3195080 - 3196867 | 66935.0 |
| hnh endonuclease | DUE52_13000 | Not Available | Negative | 3197051 - 3197563 | 19589.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
