Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription termination/antitermination factor nusg | DUE52_12855 | Not Available | Negative | 3172046 - 3172603 | 20603.0 |
| preprotein translocase subunit sece | DUE52_12860 | Not Available | Negative | 3172682 - 3172873 | 7083.54 |
| Trna-trp | Not Available | Not Available | Positive | 3172886 - 3172959 | Not Available |
| elongation factor tu | DUE52_12870 | Not Available | Negative | 3173136 - 3174323 | 43421.4 |
| Trna-thr | Not Available | Not Available | Positive | 3174383 - 3174454 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 3174540 - 3174615 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 3174698 - 3174783 | Not Available |
| hypothetical protein | DUE52_12890 | Not Available | Negative | 3174972 - 3175988 | 38318.6 |
| hypothetical protein | DUE52_12895 | Not Available | Negative | 3175993 - 3176742 | 27754.9 |
| sigma-70 family rna polymerase sigma factor | DUE52_12900 | Not Available | Negative | 3176819 - 3177406 | 22563.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
