Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l3 | DUE52_12700 | Not Available | Negative | 3117881 - 3118501 | 22109.0 |
| 30s ribosomal protein s10 | DUE52_12705 | Not Available | Negative | 3118840 - 3119145 | 11356.1 |
| elongation factor g | DUE52_12710 | Not Available | Negative | 3119295 - 3121397 | 78032.2 |
| wyl domain-containing protein | DUE52_12715 | Not Available | Negative | 3121595 - 3122653 | 40538.9 |
| hypothetical protein | DUE52_12720 | Not Available | Positive | 3122671 - 3122955 | 10392.5 |
| slipin family protein | DUE52_12725 | Not Available | Positive | 3123286 - 3124395 | 42283.4 |
| rtcb family protein | DUE52_12730 | Not Available | Positive | 3124471 - 3125997 | 55779.1 |
| hypothetical protein | DUE52_12735 | Not Available | Negative | 3126010 - 3128325 | 87807.5 |
| translocation/assembly module tamb | DUE52_12740 | Not Available | Negative | 3128322 - 3133286 | 182845.0 |
| sigma-70 family rna polymerase sigma factor | DUE52_12745 | Not Available | Positive | 3133796 - 3134554 | 29381.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
