Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1624 domain-containing protein | DUE52_12550 | Not Available | Negative | 3100535 - 3101731 | 45148.5 |
| carbamoyl-phosphate synthase small subunit | DUE52_12555 | Not Available | Negative | 3101838 - 3102953 | 41081.8 |
| 50s ribosomal protein l17 | DUE52_12560 | Not Available | Negative | 3103048 - 3103815 | 28029.2 |
| dna-directed rna polymerase subunit alpha | DUE52_12565 | Not Available | Negative | 3103820 - 3104809 | 37372.1 |
| 30s ribosomal protein s4 | DUE52_12570 | Not Available | Negative | 3104945 - 3105550 | 22977.8 |
| 30s ribosomal protein s11 | DUE52_12575 | Not Available | Negative | 3105666 - 3106061 | 14151.3 |
| 30s ribosomal protein s13 | DUE52_12580 | Not Available | Negative | 3106149 - 3106526 | 14037.1 |
| 50s ribosomal protein l36 | DUE52_12585 | Not Available | Negative | 3106536 - 3106652 | 4546.83 |
| translation initiation factor if-1 | DUE52_12590 | Not Available | Negative | 3106756 - 3106974 | 8342.29 |
| type i methionyl aminopeptidase | DUE52_12595 | Not Available | Negative | 3106978 - 3107790 | 29797.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
