Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tpm domain-containing protein | DUE52_12500 | Not Available | Positive | 3086918 - 3087727 | 28763.5 |
| hypothetical protein | DUE52_12505 | Not Available | Negative | 3087791 - 3088369 | 22283.6 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | DUE52_12510 | Not Available | Negative | 3088519 - 3090054 | 55924.5 |
| utp--glucose-1-phosphate uridylyltransferase | DUE52_12515 | Not Available | Negative | 3090286 - 3093624 | 124318.0 |
| nucleotidyl transferase | DUE52_12520 | Not Available | Negative | 3093628 - 3094575 | 34803.0 |
| low molecular weight phosphotyrosine protein phosphatase | DUE52_12525 | Not Available | Negative | 3094760 - 3095287 | 19621.0 |
| septum formation initiator family protein | DUE52_12530 | Not Available | Negative | 3095349 - 3095660 | 12203.8 |
| phosphopyruvate hydratase | DUE52_12535 | Not Available | Negative | 3095748 - 3097025 | 46224.9 |
| response regulator | DUE52_12540 | Not Available | Positive | 3097283 - 3100198 | 108248.0 |
| hypothetical protein | DUE52_12545 | Not Available | Positive | 3100338 - 3100538 | 7787.03 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
