Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_12395 | Not Available | Negative | 3066052 - 3066288 | 9090.42 |
| class c beta-lactamase-related serine hydrolase | DUE52_12400 | Not Available | Negative | 3066415 - 3068019 | 58478.3 |
| sorbosone dehydrogenase | DUE52_12405 | Not Available | Positive | 3068122 - 3069399 | 46598.3 |
| llm class flavin-dependent oxidoreductase | DUE52_12410 | Not Available | Negative | 3069666 - 3070676 | 37863.0 |
| alpha/beta hydrolase | DUE52_12415 | Not Available | Positive | 3070972 - 3072072 | 40442.1 |
| blai/meci/copy family transcriptional regulator | DUE52_12425 | Not Available | Positive | 3073100 - 3073486 | 15069.3 |
| tonb family protein | DUE52_12430 | Not Available | Positive | 3073483 - 3075462 | 73020.2 |
| tonb family protein | DUE52_12435 | Not Available | Positive | 3075470 - 3076381 | 33434.3 |
| hypothetical protein | DUE52_12440 | Not Available | Negative | 3076424 - 3076864 | 17048.4 |
| phosphoglycerate mutase | DUE52_12445 | Not Available | Negative | 3076994 - 3077506 | 18505.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
