Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_12340 | Not Available | Negative | 3050226 - 3051116 | 33625.1 |
| m1 family peptidase | DUE52_12345 | Not Available | Negative | 3051175 - 3053124 | 74574.1 |
| duf2911 domain-containing protein | DUE52_12350 | Not Available | Negative | 3053171 - 3053707 | 19736.6 |
| duf4350 domain-containing protein | DUE52_12355 | Not Available | Positive | 3053893 - 3055047 | 44562.6 |
| moxr family atpase | DUE52_12360 | Not Available | Positive | 3055063 - 3056037 | 35954.4 |
| duf58 domain-containing protein | DUE52_12365 | Not Available | Positive | 3056034 - 3057374 | 52141.2 |
| m20/m25/m40 family metallo-hydrolase | DUE52_12370 | Not Available | Positive | 3057380 - 3058840 | 54133.6 |
| t9ss c-terminal target domain-containing protein | DUE52_12375 | Not Available | Positive | 3058958 - 3061789 | 104335.0 |
| histidine kinase | DUE52_12380 | Not Available | Positive | 3061815 - 3064940 | 117772.0 |
| dna-binding response regulator | DUE52_12385 | Not Available | Positive | 3064945 - 3065589 | 23988.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
