Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxine 5'-phosphate synthase | DUE52_12290 | Not Available | Positive | 3040656 - 3041369 | 26530.5 |
| rida family protein | DUE52_12295 | Not Available | Positive | 3041460 - 3041840 | 13778.5 |
| gfo/idh/moca family oxidoreductase | DUE52_12300 | Not Available | Negative | 3041936 - 3043378 | 53807.1 |
| sterol-binding protein | DUE52_12305 | Not Available | Negative | 3043424 - 3043720 | 10579.8 |
| rna polymerase sigma-70 factor | DUE52_12310 | Not Available | Positive | 3044151 - 3044693 | 21447.3 |
| hypothetical protein | DUE52_12315 | Not Available | Positive | 3044718 - 3045575 | 32838.4 |
| hypothetical protein | DUE52_12320 | Not Available | Negative | 3045595 - 3046020 | 15890.3 |
| acyltransferase | DUE52_12325 | Not Available | Negative | 3046164 - 3047384 | 46922.7 |
| mfs transporter | DUE52_12330 | Not Available | Negative | 3047476 - 3048711 | 44468.1 |
| mfs transporter | DUE52_12335 | Not Available | Negative | 3048859 - 3050124 | 45447.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
