Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_12240 | Not Available | Negative | 3031618 - 3031923 | 10826.1 |
| aldo/keto reductase | DUE52_12245 | Not Available | Positive | 3032042 - 3033073 | 38133.1 |
| hypothetical protein | DUE52_12250 | Not Available | Negative | 3033132 - 3033494 | 13208.1 |
| hypothetical protein | DUE52_12255 | Not Available | Positive | 3033831 - 3034463 | 20705.4 |
| port family protein | DUE52_12260 | Not Available | Negative | 3034677 - 3035369 | 25169.2 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | DUE52_12265 | Not Available | Positive | 3035611 - 3036423 | 31175.7 |
| anion permease | DUE52_12270 | Not Available | Negative | 3036450 - 3037865 | 51072.2 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | DUE52_12275 | Not Available | Negative | 3038270 - 3039325 | 39472.3 |
| cvpa family protein | DUE52_12280 | Not Available | Negative | 3039322 - 3039894 | 21470.7 |
| gatb/yqey domain-containing protein | DUE52_12285 | Not Available | Negative | 3040062 - 3040517 | 16516.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
