Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna-binding protein | DUE52_12190 | Not Available | Positive | 3017032 - 3020607 | 130987.0 |
| hypothetical protein | DUE52_12195 | Not Available | Negative | 3020617 - 3022197 | 57511.5 |
| glutamate racemase | DUE52_12200 | Not Available | Negative | 3022201 - 3023025 | 30797.9 |
| mce family protein | DUE52_12205 | Not Available | Negative | 3023052 - 3024101 | 37572.2 |
| atp-binding cassette domain-containing protein | DUE52_12210 | Not Available | Negative | 3024236 - 3025012 | 29045.8 |
| abc transporter permease | DUE52_12215 | Not Available | Negative | 3025016 - 3025831 | 29269.9 |
| hypothetical protein | DUE52_12220 | Not Available | Positive | 3026032 - 3027381 | 50091.2 |
| mbl fold metallo-hydrolase | DUE52_12225 | Not Available | Negative | 3027384 - 3028517 | 42010.7 |
| hypothetical protein | DUE52_12230 | Not Available | Negative | 3028581 - 3029051 | 17671.3 |
| hypothetical protein | DUE52_12235 | Not Available | Positive | 3029295 - 3031616 | 87196.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
