Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna mismatch repair protein muts | DUE52_12090 | Not Available | Positive | 2987414 - 2989003 | 60785.5 |
| port family protein | DUE52_12095 | Not Available | Positive | 2989241 - 2989852 | 22351.4 |
| m20/m25/m40 family metallo-hydrolase | DUE52_12100 | Not Available | Negative | 2989896 - 2991392 | 54001.4 |
| 3-hydroxyacyl-coa dehydrogenase | DUE52_12105 | Not Available | Negative | 2991411 - 2993573 | 78084.2 |
| acetyl-coa c-acetyltransferase | DUE52_12110 | Not Available | Negative | 2993584 - 2994792 | 42295.0 |
| polysaccharide biosynthesis protein | DUE52_12115 | Not Available | Negative | 2994937 - 2996883 | 72679.3 |
| tigr01777 family protein | DUE52_12120 | Not Available | Negative | 2997009 - 2997926 | 33612.6 |
| disulfide bond formation protein dsbd | DUE52_12125 | Not Available | Negative | 2997987 - 3000149 | 78399.8 |
| phytanoyl-coa dioxygenase | DUE52_12130 | Not Available | Negative | 3000413 - 3001249 | 31952.6 |
| arac family transcriptional regulator | DUE52_12135 | Not Available | Positive | 3001393 - 3002262 | 33323.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
