Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | DUE52_12040 | Not Available | Negative | 2976461 - 2977153 | 25967.1 |
| abc transporter permease | DUE52_12045 | Not Available | Negative | 2977156 - 2978412 | 45908.8 |
| hlyd family efflux transporter periplasmic adaptor subunit | DUE52_12050 | Not Available | Negative | 2978530 - 2979621 | 40644.1 |
| tolc family protein | DUE52_12055 | Not Available | Negative | 2979671 - 2980984 | 49669.3 |
| hypothetical protein | DUE52_12060 | Not Available | Positive | 2981203 - 2981448 | 9038.13 |
| hypothetical protein | DUE52_12065 | Not Available | Negative | 2982325 - 2982507 | 7072.64 |
| hypothetical protein | DUE52_12070 | Not Available | Negative | 2982652 - 2983365 | 25730.3 |
| duf3520 domain-containing protein | DUE52_12075 | Not Available | Negative | 2983533 - 2985401 | 68114.0 |
| sigma-70 family rna polymerase sigma factor | DUE52_12080 | Not Available | Positive | 2985513 - 2986103 | 23124.5 |
| tonb family protein | DUE52_12085 | Not Available | Positive | 2986096 - 2987316 | 44047.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
