Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | DUE52_01145 | Not Available | Negative | 300694 - 301176 | 18808.7 |
| duf167 domain-containing protein | DUE52_01150 | Not Available | Negative | 301266 - 301535 | 9733.82 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 301901 - 302355 | Not Available |
| tautomerase family protein | DUE52_01155 | Not Available | Negative | 301546 - 301935 | 14791.0 |
| phosphoribosylformylglycinamidine cyclo-ligase | DUE52_01160 | Not Available | Negative | 301982 - 303154 | 42466.6 |
| galactose oxidase | DUE52_01165 | Not Available | Negative | 303158 - 304126 | 35883.9 |
| gfo/idh/moca family oxidoreductase | DUE52_01170 | Not Available | Negative | 304234 - 305211 | 35901.9 |
| duf481 domain-containing protein | DUE52_01175 | Not Available | Positive | 305308 - 306156 | 31477.5 |
| pas domain-containing protein | DUE52_01180 | Not Available | Positive | 306253 - 306780 | 20298.1 |
| tonb-dependent receptor | DUE52_01185 | Not Available | Negative | 306799 - 309267 | 90716.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
