Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DUE52_11990 | Not Available | Positive | 2967292 - 2968053 | 28963.0 |
| ccmd family protein | DUE52_11995 | Not Available | Positive | 2968096 - 2968305 | 7830.95 |
| cytochrome c maturation protein ccme | DUE52_12000 | Not Available | Positive | 2968390 - 2968830 | 16140.4 |
| cytochrome c biogenesis protein | DUE52_12005 | Not Available | Positive | 2969151 - 2971787 | 98766.4 |
| hypothetical protein | DUE52_12010 | Not Available | Positive | 2971795 - 2972022 | 8833.39 |
| hlyc/corc family transporter | DUE52_12015 | Not Available | Positive | 2972104 - 2973399 | 48469.6 |
| dna-binding response regulator | DUE52_12020 | Not Available | Negative | 2973496 - 2974281 | 30097.0 |
| pa2169 family four-helix-bundle protein | DUE52_12025 | Not Available | Positive | 2974366 - 2974821 | 16972.7 |
| hypothetical protein | DUE52_12030 | Not Available | Negative | 2975028 - 2975372 | 12425.9 |
| histidine kinase | DUE52_12035 | Not Available | Negative | 2975452 - 2976477 | 39342.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
